#NEXUS [ Title : Data from a single replication of the computer simulation (R=5)] begin taxa; dimensions ntax= 24; taxlabels 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 ; end; begin characters; dimensions nchar= 500; format missing=? gap=- matchchar=. datatype=nucleotide interleave=yes; matrix [!Domain=Data;] 1 AAGCTATGGTGCTCTGTCCCATCACGCGGACCCGTGCACGCTGACGTTATTCCATAATCATGACGCTTACATTTCCGCAA 2 .................................................C.............................. 3 ..................................C.G........................................... 4 T........C........................C............................................. 5 T........C........................C..............C.........................T.... 6 T........C........................C............................................. 7 T........C........................C............................................. 8 T........C........................C............................................. 9 T........C...........C............C............................................. 10 T......A.C........................C...T......................................... 11 T.....CA.C........................C...T...............................G......... 12 T........C........................C............................................. 13 T........C........................C..................G.......................... 14 T........C........................C..................G.......................... 15 T........C........................C...........C......G.......................... 16 T........C...................G....C.............C....G.......................... 17 T........C...................G....C..................G...C...................... 18 T........C........................C...........C......G......C................... 19 T........C.........T..............C..................G.......................... 20 T........C.........T..............C..................G.G........................ 21 T........C.........T........A.....C..................G.......................... 22 T........C..........G.............C....A.............G.......................... 23 T.AG.....C.........T.......A......C....A.............G.......................... 24 T........C..C...............A.....C..................G......C................... 1 GGCGCCCAATAGCCTTAGCTTGCCTTTGGACCCTACCTAAACTACTGCTGGGGAAATCCGAAAGGGCTGTAGGGGTGGGA 2 .........................C...................................................... 3 .........................C...................................................... 4 .........................C............G...................................A..... 5 .........................C............G...C...............................A..... 6 .............T...........C............G.............A...................A....... 7 .........................C..........T.G.............A.........................A. 8 .........................C............G.........C...A........................... 9 .........................C............G.............A........................... 10 ............T............C............G.............A........................... 11 .........................C............GG........................................ 12 .........................C............G.............A........................... 13 .....................C...C..........................A........................... 14 .....................C...C..........................A........................... 15 .....................C...C............G.............A........................... 16 .....................C...C............G.............A........................... 17 .....................C...C........T...G.............A........................... 18 ........G...............CC..AG........G...........A.A.....T..................... 19 ...............C.........C............G.............A...........C............... 20 ...............C.........C..........................A...........C..C............ 21 ...............C.........C............G.............A........................... 22 ........G......C...C.....C............G.............A........................... 23 ........G......C...C.....C............G.............A........................... 24 .......................T.C............G..........A..A..........................G 1 GAACGCGTAGACGGTTCTCGTCTAGGTGCGGGTTATGAGTTCCGGGACGCCGGTGAAATCGGTAAGGGCTCCATGATATA 2 ..........................................................C..................... 3 ...............................................T................................ 4 ...............................................T................................ 5 ...............................................T................................ 6 ...............................................T............A................... 7 ...............................A...............T................................ 8 ...............................A....A..........T................................ 9 .............A....T............AC..............T................................ 10 ...............................A...............T................................ 11 ..G.........A..................A...............T................................ 12 ...............................AA..............T................................ 13 ........G......................A.C...C.........T................................ 14 ........G......................A.C...C.........T................................ 15 ........G......................A.C...C.........T................................ 16 ........G..............G.......A.C...C.........T...............G................ 17 .......CG..............G.......A.C...C.........T...............G................ 18 ........G.............C.A......A.C...C.........T................................ 19 ...............................A.....C.........T...........T.................... 20 ...............................AC....C.........T...........T.................... 21 ...............................A.....C.........T......A....T.................... 22 ...............C...............A.C...C.........T...........T.................... 23 ...............................A.C...C.C.......T....A......T.................... 24 ...............................A.....C.....A...T...........T.................... 1 TAGGGAGGTGCAACTCTCTAAGACTCCACGCCCACACTGGTAAAGAATTACCACTGCCTAATGGGCAGGTGGGAATTAGA 2 .............................A............................C.......G..C.......... 3 ............................T..........T........................................ 4 .......................................T......G................................. 5 .........A.............................T......G................................. 6 .......................A..T............T........................................ 7 ...................................T...T..................................G..... 8 ...................................T...T..................................G..... 9 ...................................T...T..................................G..... 10 ...................................T...T..................................G..... 11 ..................................GT...T..................................G..... 12 .....................A.................T..................................G..... 13 ..A..........T.A....................A..T...............................A..GC.... 14 .............T......................A..T...............................A..G..... 15 .............T.........................T...............................A..G..... 16 .............T.........................T...............................A..G..... 17 .............T.........................T...............................A..G..... 18 .......................................T.............T.................A..G....G 19 .......................................T........C.................T....A..G..... 20 .......................................T........C.................T....A..G..... 21 .......................................T........C.................T....A..G..... 22 ...........................G...........T..G.....C.................T....A..G..... 23 .......................................T..G.....C.................T....A..G..... 24 ......................G....G...........T..........................T....A..G..... 1 ACGAAGCGTGCGTCCTTAATACGGGGAATGAATGATATGATGAACATAGGGCGTGTTACGTATACACACCCTATACCGAG 2 .......A........................................................................ 3 ..........................................G..............................C...... 4 G.................G.......................G..............................C....G. 5 G.................G.......................G.............C................C....G. 6 ..........................................G..........................T...C...AG. 7 ...............C............C.............G............C.............TT..C....G. 8 ...............C............C.............G..........................T........G. 9 ..........................................G........T.................TT.GC....G. 10 ..........................................G..........................TT..C....G. 11 ..........................................G..........................TT..C....G. 12 ..........................................G.....................T....TT..C....G. 13 ...G............A.........................G......................T...T...C....G. 14 ...G............A.........................G......................C...T...C....G. 15 ................A.........................G..........................T...C....G. 16 ........................A.................G..........................T...C....G. 17 ........................A.................G...............T..........T...C....G. 18 ..........................................G..........................T...C....G. 19 .....................................G....G..........................T...C..A.G. 20 .....................................G....G..........................T...C...... 21 .....................................G....G..........................T...C....G. 22 .....................................G....G..........................T...C...AG. 23 .................................CG..G....G..........................T...C...AG. 24 ......T..............................G....G..........................T...C....G. 1 TATTTGTTGCGCCTTCTCTTCAATGCACTGTCGTTGAACAGTTCCTCTACTACGTGTGTGCCGAACCCACGATCCTCGTA 2 ..............................................A................................. 3 ......................................T.A.....A................................. 4 ........................................A.....A................................. 5 .............C......................G...A.....A......................T.......... 6 ........................................A.....A................................. 7 ............................C...........A.....A................................. 8 .....A.................C....CT..........A.....A..........................T...... 9 ............................C...........A.....A................................. 10 ............................C...........A.....A...C...............T........C.... 11 ............................C...........A.....A............................C.... 12 ............................C...........A.....A................................. 13 ..................................C.C...A.....A...............A....T............ 14 .................................C..C...A.....A...............A....T............ 15 .................................C......A.....A...............A....T............ 16 ..............................C..C......A.....A...............A....T............ 17 .................................C......A..T..A...............A....T............ 18 ..........C......................C......A.....A...............A....T..A......... 19 ........................................A.....A................................G 20 ........................................A.....G................................G 21 ........................................A.....A................................G 22 ..C.....................................A.....A..........A.........A...........G 23 ........................................A.....A..........A.....................G 24 ........................................A....CA................................. 1 CCCCCTCCCCGGGACATCAG 2 .................... 3 .........T.......... 4 ......T............. 5 ......T...........G. 6 ......T.......T..... 7 ......T............. 8 ......T............. 9 ......T............. 10 ......T............. 11 ......T............C 12 ......T............. 13 ......T............. 14 ......T............. 15 ......T............. 16 ......T............. 17 ......T............. 18 ......T............. 19 ......T............A 20 ......T.........C..A 21 ......T............A 22 ......T............A 23 ......T............A 24 ......T............T ; end;